Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015945141.1_cds_XP_016487749.1_78453
CDS Infomation

[gene=LOC107807822] [db_xref=GeneID:107807822] [protein=pentatricopeptide repeat-containing protein At5g50990 isoform X3] [protein_id=XP_016487749.1] [location=complement(34485..35777)] [gbkey=CDS]
Sequence

ATGATTGCTAGTTTTATGAAGATGGGGGCAGTTGATGTTGCCAAGACGATATTTAATGAA
GTTCCCCTCGGGGATTTGGTTACTTGGAACTCACTGATTGGAGGTTATGTCAAAAATGAC
ATGTTTAAGGAAGCACTAAGTGTCTTCAGAAAGATGCTGAGGTCTAATGTTGAACCAGAT
GGATATAGTTTTGCGTCTGTTATTACTGCATGTGCAAGACTTGGAGCCATTGATCATGCT
AAGTGGGTACACCACTTAATGATTGAGAAAAAGATTGAGCTAAATTACATTCTTTCTTCT
GCTTTGATAGATATGTACTCGAAATGTGGTAGAATCGAGATAGCTAGAGGAATTTTTGAT
AGTGTTGATCACATGAATGTTTCTGTCTGGAATGCGCTGATTAATGGATTAGCAATCCAT
GGTCTTGCTTTAGATGCAATTGGGATACTCTCACAGATGGGGCCAGAAAATGTTTCACCT
GATAGTATTACTTTTATTGGGCTTCTAACAGCATGTAGTCATTGTGGGTTGGTTGAAGAG
GGTCGGAAGTATTTTGATCTAATGAAAAGTATGTATCTGATACAACCGCAACTTGAGCAT
TATGGAGCAATGGTTGATCTGCTAGGCAGAGCTGGACTGCTTGATGAAGCTTATACAATG
ATCAAGGAAATGCCAATAGAACCTGATATAATCATATGGAGGACATTTCTCAGTGCTTGT
AGAATTCACAAAAACTCTGAGATGGGTGAACTTGCTAGCACAAAAATATCTCATCTTGGC
AGCGGAGATTATGTTTTACTGTCAAACATTTATTGTTCTACTAATAAATGGGATAATGCC
GAGAAAGTTAGATATGTGATGAAACGGAAAGGTGTTCGAAAAAGTAGTGGGAAAAGTTGG
GTTGAAGTGGGTAATGTTGTTCACCAGTTCAAGGCAGGTGATCGATCACACCCTGAAGCC
GAACTAATATATAAAACTTTGAAGGAATTGATTCATCGAACCAAATTGGAAGGATTTAGT
TCCACGACTGAGTTGGTTTTGATGGACATTTCTGACGAGGAAAAGGAGGAAAATTTGAGT
TACCATAGTGAAAAATTGGCATTAGCCTATGGGATCTTAAAATCTAGTCCTGGAACTCGC
ATTCAAGTTTCAAAAAATCTTCGGACTTGTCTAGATTGCCATTCTTGGATGAAAGTGGTA
GCAAAGGTGTTGAATAGGGAGATCATTGTGAGGGACAGAATCCGCTTTCATCACTTTGTA
GATGGTTATTGTAGTTGTGGGGATTACTGGTAG

Peptide Sequence

PEP ID

XP_016487749.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At5g50990 isoform X3 [Nicotiana tabacum]
Sequence

MIASFMKMGAVDVAKTIFNEVPLGDLVTWNSLIGGYVKNDMFKEALSVFRKMLRSNVEPD
GYSFASVITACARLGAIDHAKWVHHLMIEKKIELNYILSSALIDMYSKCGRIEIARGIFD
SVDHMNVSVWNALINGLAIHGLALDAIGILSQMGPENVSPDSITFIGLLTACSHCGLVEE
GRKYFDLMKSMYLIQPQLEHYGAMVDLLGRAGLLDEAYTMIKEMPIEPDIIIWRTFLSAC
RIHKNSEMGELASTKISHLGSGDYVLLSNIYCSTNKWDNAEKVRYVMKRKGVRKSSGKSW
VEVGNVVHQFKAGDRSHPEAELIYKTLKELIHRTKLEGFSSTTELVLMDISDEEKEENLS
YHSEKLALAYGILKSSPGTRIQVSKNLRTCLDCHSWMKVVAKVLNREIIVRDRIRFHHFV
DGYCSCGDYW

Transcript Sequence

Gene sequence data has not been registered.